Exciting news!!! The first manuscript of the lab was just published in Microbiology Spectrum!! Here we investigate, in a comparative study, how Influenza A and human adenovirus C5 trigger ferroptosis hallmarks. Huge congratulations to Ana Manzano-Covarrubias to her firts first author paper!!

Respiratory viruses induce ferroptosis-like features in lung epithelial cells
ABSTRACT During infection, viruses can modulate various regulated cell death (RCD) mechanisms to evade host immunity and enhance replication. However, less is known about how viruses alter the recently discovered RCD ferroptosis, which is characterized by an iron-dependent accumulation of lipid peroxidation and mitochondrial fragmentation. InfluenzaA virus (IAV) H1N1 and human adenovirus type C5
(HAdV-C5) are two common causes of respiratory infections of the upper and lower respiratory tracts and can lead to severe illness. While IAV has been shown to induce ferroptosis to support its replication, less is known about whether this is also true for HAdV-C5. Here, we perform a comparative study investigating ferroptosis features during IAV H1N1 and HAdV-C5 infections using alveolar (A549) and bronchial (BEAS-2B) epithelial cells. Our data reveal that HAdV-C5, similar to H1N1, induces lipid peroxidation in a time-dependent manner, which is partially suppressed in the presence of the ferroptosis inhibitor ferrostatin-1. Strikingly, HAdV-C5 infections only lead to changes in ferritin protein levels, which is responsible for iron storage, during late stages of infection. Furthermore, both H1N1 and HAdV-C5 infections trigger a profound mitochondrial network remodeling in A549, BEAS-2B, and primary human epithelial cells, comparable to that induced by the ferroptosis inducer RSL3, with effectsvarying by cell type and infection stage. These findings suggest that HAdV-C5, just like H1N1, can activate ferroptosis-like processes, highlighting a potential role for lipid peroxidation and mitochondrial alterations in adenoviral infection.
NWO XS grant awarded to the lab!!
AI-guided exploration of viral shells
Our MitoVir lab at the University of Groningen has received an NWO Open Competition Domain Science XS grant for the project “AI-guided exploration of viral capsid interfaces as antiviral targets.” [Link]
Viruses are tiny infectious particles that protect their genetic material inside a shell, similar to how an egg protects what is inside. This shell is essential for the virus to enter cells and spread. Many antivirals work by blocking virus multiplication in cells, but these can lose effectiveness and may cause side effects.
In this one‑year project, we explore a different idea: targeting the virus’ shell itself. Using artificial intelligence, we will search for weak spots in this shell in human adenovirus and design molecules that disrupt it. This research aims to open new routes toward medicines that prevent viral infections.
The lab is celebrating Karim getting tenure – Thanks to all for the help in getting me there!!!
Celebrating a milestone like tenure feels a bit surreal—equal parts relief, gratitude, and excitement for what’s ahead. Rather than marking the occasion quietly, I had the pleasure of celebrating it in the best possible way: with the lab.
We kicked things off at the bowling alley, which quickly revealed that pipetting accuracy does not necessarily translate to bowling precision. There were a few impressive strikes, plenty of wildly unpredictable throws, and a lot of laughter in between. It was a reminder that while our day-to-day work revolves around careful experiments and data, the spirit of the group is just as much about camaraderie and shared moments outside the lab.

Afterwards, we headed out for dinner, where the pace slowed down but the energy didn’t. Conversations drifted from science to travel plans to the occasional debate about the “right” way to analyze data—some habits never switch off. Sitting there, it struck me how fortunate I am to work with such a talented, driven, and genuinely fun group of people.

Tenure is often seen as an individual milestone, but it’s really built on the support, collaboration, and inspiration of those around you. I’m incredibly grateful for this team and proud of what we’ve built together—and I’m looking forward to everything that comes next.
The lab is growing – We welcome Victor and Amanda
We’re excited to share that two new members have joined the Rafie Lab family: Victor Gawriljuk Ferraro Oliveira, who is starting as a postdoc, and Amanda Estevam Carvalho, a visiting PhD student from Brazil. 🎉
Victor has a background in structural biology and has spent the last few years studying how different infectious diseases work at the molecular level. He’ll be diving into the fascinating world of adenoviruses here in the lab, helping us understand how viral proteins function and how we might outsmart them.
Amanda joins us from Brazil, where her PhD work normally focuses on the lung. She’s here for a short stint in virology, exploring how adenoviruses use their proteins to kick-start and maintain infection. During her visit, she’ll be helping us identify viral “weak spots” that could inspire the development of new antiviral strategies.
Both Victor and Amanda will be working on projects centered around understanding how adenoviruses (and their proteins) promote infection — all with the goal of helping us design better, smarter antiviral approaches in the future.
We’re thrilled to have them on board. If you see them around the lab or department, please say hello and make them feel welcome! 😊
Victor Gawriljuk Ferraro Oliveira
Victor Gawriljuk Ferraro Oliveira obtained his Bachelor and Masters degree in Physics and Biomolecular Sciences at the University of São Paulo in 2021, he then started his PhD at the University of Groningen under the supervision of Prof. Dr. Matthew Groves. Since his Masters Victor’s research had been mainly focused on the structural biology and drug discovery for different infectious diseases. Now as a post-doc at the Rafie Lab he is currently working with the structural and functional characterization of different adenovirus targets.
Extracellular vesicles from bronchoalveolar lavage fluid provide insights into the inhaled corticosteroids treatment response in COPD
Extracellular vesicles from bronchoalveolar lavage fluid provide insights into the inhaled corticosteroids treatment response in COPD
The Association Between Herpes Zoster, Antiherpetic Therapies, and Alzheimer’s Disease: A Comprehensive Systematic Review
The Association Between Herpes Zoster, Antiherpetic Therapies, and Alzheimer’s Disease: A Comprehensive Systematic Review





